alan-turing-institute / bio-Turing-Way

Experimenting with JupyterBooks, Sphinx, and training materials for biomed/life sciences from the Turing Way.
https://the-turing-way-personas.netlify.app/welcome
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Couldn't understand Output of tests #40

Open pranavich18 opened 2 years ago

pranavich18 commented 2 years ago

I am getting this output while testing the pathways, after running ./run_tests.sh Screenshot from 2022-03-09 14-42-09

Is this the expected behavior?

malvikasharan commented 2 years ago

Hi Pranav, follow these steps to test code locally:

  1. Follow Instructions for "users" as well as "Developers" as described here: https://github.com/alan-turing-institute/bio-Turing-Way/tree/main/pathways <-- for this you will be in bio-Turing-Way/pathways/ directory
  2. run cd .. to come back to root directory
  3. runpython -m pathways.main pathways master to create a local build

For instance, I can see the label and card feature locally at file:///Users/malvika/github/bio-Turing-Way/master_copy/_build/html/welcome.html#different-pathways

If this works, you can then headover to this issue and test Part 2 and 3: https://github.com/alan-turing-institute/the-turing-way/issues/2266