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alan-turing-institute / empiarreader

Reader for EMPIAR datasets
BSD 3-Clause "New" or "Revised" License
9 stars 4 forks source link

Jgreer/cli #33

Closed JatGreer closed 1 year ago

JatGreer commented 1 year ago

Implements basic CLI with funcitonality for CL searching of EMPIAR archive, creation of list(s) of files to download, and utility to download a list of files to a target dir. Should be general enough to allow empiarreader to be used to download non-mrc and non-star files (although it will download those as well if asked to) in addition to intake utilities.

Search and download CL functionality is manually tested but no integration test implemented yet

Also implements choice of wildcards/regexp, with bash-style wildcards the default

mooniean commented 1 year ago

this looks great!!

JatGreer commented 1 year ago

On the renaming the empiar/empiar.py directory, feel free to rename it. I couldn't come up with a good name - hence the confusing one!