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alan-turing-institute
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vivarium_population_spenser
Vivarium microsimulation tools used to model population evolution with the SPENSER project
GNU General Public License v3.0
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Initial modifications to run with SPENSER data
#1
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crangelsmith
closed
4 years ago
crangelsmith
commented
4 years ago
[x] Modify setup.py file removing version for tables
[x] Add mortality test
[x] New TestPopulation object that contains our data.
[x] Add dummy Testfile.csv to get CI working
crangelsmith
commented
4 years ago
To run this you need to:
Modify the path to the data files in lines 17 and 19 of tests/population/test_mortality.py for your own path
Make sure your file has the columns PID,location,sex,age,ethnicity
Run:
python setup.py install
pytest tests/population/test_mortality.py