Closed ppxasjsm closed 4 years ago
Yes, if it were me I'd put a 2D structure inside each bubble, and probably also build in some cycle closure stuff.
Might also be worth citing (in the paper) recent work on improved layouts of chemical graphs, e.g.
I heard that Chemical Computing Group was also doing stuff in this space (A-optimal and D-optimal graphs) but I am not offhand finding that with Google Scholar. I think it's bked into CCG's AMBER-TI thing.
I added structures and cycles etc. here 959cd5d0a75b82d714541a121a12b636f2721b4b.
Will add the additional citations.
I added an additional figure to the paper today showing two types of perturbation networks with @JenkeScheen help. At the moment it is quite plane looking. Should chemical structures or cycle closures or the like be added for ease of discussion in the analysis section?
Figure.pdf