I'm preparing the 2.0.1 release, I tag it as 2.0.1 and upload it to test.pypi.org. Then I pip install the package locally with
pip install -i https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple alchemlyb=="2.0.1"
Then I run the test with pytest --pyargs alchemlyb
However, the test would stuck indefinitely at tests/test_workflow_ABFE.py, where it seems to be stuck at
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/site-packages/alchemlyb/tests/test_workflow_ABFE.py", line 39, in test_nofilematch
ABFE(
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/site-packages/alchemlyb/workflows/abfe.py", line 85, in __init__
self.file_list = list(glob(reg_exp, recursive=True))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/glob.py", line 28, in glob
return list(iglob(pathname, root_dir=root_dir, dir_fd=dir_fd, recursive=recursive,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/glob.py", line 97, in _iglob
for name in glob_in_dir(_join(root_dir, dirname), basename, dir_fd, dironly,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/glob.py", line 106, in _glob1
names = _listdir(dirname, dir_fd, dironly)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/glob.py", line 177, in _listdir
return list(it)
^^^^^^^^
File "/Users/zhiyiwu/miniconda3_x86/envs/test/lib/python3.11/glob.py", line 160, in _iterdir
for entry in it:
KeyboardInterrupt
However, if I go to the source code and run pip install -e . to install this package, and then run it works pytest --pyargs alchemlyb completely fine.
I'm preparing the 2.0.1 release, I tag it as 2.0.1 and upload it to
test.pypi.org
. Then I pip install the package locally withpip install -i https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple alchemlyb=="2.0.1"
Then I run the test withpytest --pyargs alchemlyb
However, the test would stuck indefinitely at
tests/test_workflow_ABFE.py
, where it seems to be stuck atHowever, if I go to the source code and run
pip install -e .
to install this package, and then run it workspytest --pyargs alchemlyb
completely fine.