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alejandrogzi / bed2gtf

high-performance BED-to-GTF converter written in Rust
MIT License
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Output is not sorted #3

Closed alejandrogzi closed 1 year ago

alejandrogzi commented 1 year ago

Even since gtfsort exists, user may want to receive an output nicely sorted. The computation cost is not that significant (~0.2 seconds).

How to do it: Implement an early ordering layer before converting lines into BedRecords.

alejandrogzi commented 1 year ago

Fixed in v.1.7.0