Pre-sorting using a lexicograph-based algorithm

alejandrogzi / bed2gtf

high-performance BED-to-GTF converter written in Rust

MIT License

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Pre-sorting using a lexicograph-based algorithm #4

Closed alejandrogzi closed 1 year ago

alejandrogzi commented 1 year ago

This PR modifies the main bed2gtf fuction, adding a pre-sorting step. To achieve this, a new feature implemented for the BedRecord struct allows easy access to an outer layer for the sorting step. An error script has also been added, similar function as bed2gff.