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alemorm / ucsf-radiology-getting-started

Getting Started Tutorial for UCSF Radiology new members for Git, Bash, MRI Physics, Server resources (hosts, python versions, ML libraries, MATLAB, VNC)
https://alemorm.github.io/ucsf-radiology-getting-started/
MIT License
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Add info about MRI visualization tools #9

Open jenncummings opened 4 years ago

jenncummings commented 4 years ago

Ideally something that works on all platforms (I have had issues with Windows compatibility)

alemorm commented 4 years ago

Hi @jenncummings, thanks for the suggestion, I have been thinking about this a lot myself. Right now the only visualization tool I am sharing is the MATLAB-specific Imagine which I have used for the last couple of years and really like. I get that this is not ideal since MATLAB is not free (especially for summer interns).

Someone in the department pointed out ITK as a great open source scientific visualization tool but I have not had a chance to use it myself. As for Windows, I use a personal Windows laptop and desktop for work but I use the Windows Subsystem for Linux. Maybe I could share that as well, since you need a C++ compiler to build a tool like ITK.