Add adaptive to Interactome.prune - make this pruneRegulon function the same as VIPER's

alevax / pyviper

Porting of Protein Activity and Pathway Inference to single cell and Python.

MIT License

10 stars 0 forks source link

Add adaptive to Interactome.prune - make this pruneRegulon function the same as VIPER's #18

Closed alexanderlewis99 closed 1 year ago

alexanderlewis99 commented 1 year ago

No urgency on this. Not sure how useful adaptive is. It might be applicable for NaRnEA but it is counterproductive for aREA and the justification for the particular approach is not quite clear.

alexanderlewis99 commented 1 year ago

We've decided not to include this method of Mariano's