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alevax / pyviper

Porting of Protein Activity and Pathway Inference to single cell and Python.
MIT License
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Check whether method="rank" in Pyther should result in our custom rank_norm function being used #20

Closed alexanderlewis99 closed 1 year ago

alexanderlewis99 commented 1 year ago

Our custom rank_norm function does a double rank transformation. This is different than the single rank transformation accomplished by scipy.stats

alexanderlewis99 commented 1 year ago

Rank and double rank transform are now both options, added by commits bbe0f4d and a00ed02.