Compare SCENIC via pyVIPER versus ARACNe via pyVIPER

alevax / pyviper

Porting of Protein Activity and Pathway Inference to single cell and Python.

MIT License

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Open alexanderlewis99 opened 4 months ago

alexanderlewis99 commented 4 months ago

Same input data / same metacells --> networks --> VIPER --> correlation

Benchmark whether we find the same clusters