alexdobin / STAR

RNA-seq aligner
MIT License
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Analysis of Cite-seq data with STARsolo #2135

Open jfoedfjwofa opened 1 month ago

jfoedfjwofa commented 1 month ago

Hello everyone. I have always been helped alot by this community!

Now I'm trying to conduct alignment of my 10x scRNA seq data, which have both RNA and ADT(Cite-seq) data. CellRanger is not available in my PC environment, so it is preferred  for me to analyze the data using STARsolo. 

Looking at previous threads, it seems that there is no established method for dealing with Cite-seq data using STARsolo.  Has there been any recent updates on this topic or has anyone successfully analyzed Cite-seq data using STARsolo?

I would appreciate any advice anyone can give me.

Best regards,