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alexenge
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hu-neuro-pipeline
Single trial EEG pipeline at the Abdel Rahman Lab for Neurocognitive Psychology, Humboldt-Universität zu Berlin
https://hu-neuro-pipeline.readthedocs.io
MIT License
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Change default for `ica_n_components` from `0.99` (i.e., 99% explained variance) to `None` (all components, usually number of channels minus one)
#136
alexenge
closed
1 year ago
0
Allow setting `ica_n_components` to `None` and make it the new default
#135
alexenge
closed
1 year ago
0
Move documentation source files into new `doc/source/` sub-directory
#134
alexenge
closed
1 year ago
0
Move source files for documentation into separate `source/` sub-directory
#133
alexenge
closed
1 year ago
0
Switch to MyST-NB (instead of nbsphinx) for rendering doc examples
#132
alexenge
closed
1 year ago
0
Fix bug so that Read the Docs will render the examples again
#131
alexenge
closed
1 year ago
0
Add ERP CORE example (processing N400 data in Python) to docs
#130
alexenge
closed
1 year ago
0
Rename functions for getting sample datasets (now `datasets.get_ucap()` and `datasets.get_erpcore()`)
#129
alexenge
closed
1 year ago
0
Re-factor dataset fetchers
#128
alexenge
closed
1 year ago
0
Support processing of non-BrainVision / non-Abdel Rahman Lab data (e.g., ERP CORE data)
#127
alexenge
closed
1 year ago
0
Add ERP CORE example to docs
#126
alexenge
closed
1 year ago
0
Support different raw EEG input file types beyond BrainVision (Note: Input argument `vhdr_files` is now called `raw_files`!)
#125
alexenge
closed
1 year ago
0
Support processing of ERP CORE data
#124
alexenge
closed
1 year ago
0
Fix content of tables in Usage / Input arguments
#123
alexenge
closed
10 months ago
0
Add functions to download sample data from the ERP CORE dataset
#122
alexenge
closed
1 year ago
0
Add fetcher for the ERP CORE dataset(s)
#121
alexenge
closed
1 year ago
0
Improve documentation
#120
alexenge
opened
1 year ago
0
Create new documentation with Sphinx, hosted on ReadTheDocs (https://hu-neuro-pipeline.readthedocs.io)
#119
alexenge
closed
1 year ago
0
Use `pick` method instead of `pick_channels` as it is now an MNE legacy function
#118
alexenge
opened
1 year ago
0
In README, let users check if they already have (Mini)conda installed
#117
alexenge
closed
9 months ago
0
Fix group level error
#116
kirstenstark
closed
1 year ago
0
Error at group level (grand averaging)
#115
kirstenstark
closed
1 year ago
0
Allow options for EEG re-referencing
#114
alexenge
closed
11 months ago
0
Update lab name and website in README and elsewhere
#113
alexenge
closed
1 year ago
0
Update lab name and website in README and elsewhere
#112
alexenge
closed
1 year ago
0
Create evokeds with `average_by` based on arbitrary log file query strings (instead of log file column names)
#111
alexenge
closed
1 year ago
0
No results object created when `output_dir` has files from previous runs
#110
alexenge
closed
1 year ago
0
Fix description of temporary *high-pass* filter prior to ICA
#109
alexenge
closed
1 year ago
0
Description of (temporary) filter before ICA is wrong
#108
alexenge
closed
1 year ago
0
Create evokeds based on custom filters
#107
alexenge
closed
1 year ago
0
Add instructions for how to install development version from GitHub in README
#106
alexenge
closed
1 year ago
0
Add instructions for installing development version from GitHub
#105
alexenge
closed
1 year ago
0
When writing epochs, the epoch trigger column is now called `"event_id"` instead of `"condition"`
#104
alexenge
closed
1 year ago
0
When writing epochs, triggers shouldn't go into a column called `"condition"`
#103
alexenge
closed
1 year ago
0
Write `none` for `NaN` (= invalid JSON) to config file when passing data frames as `log_files`
#102
alexenge
closed
1 year ago
0
When passing data frames as `log_files` , config file may contain `NaN`s, which are invalid in JSON
#101
alexenge
closed
1 year ago
0
Don't convert mastoid/auricular channels to misc type
#100
alexenge
opened
1 year ago
1
Hide some unimportant messages from the console
#99
alexenge
closed
1 year ago
0
Prettify console output
#98
alexenge
closed
1 year ago
0
Allow more recent pandas versions than 1.4.0 in dependencies
#97
alexenge
closed
1 year ago
0
Allow more recent pandas versions
#96
alexenge
closed
1 year ago
0
Add Python version to `package_versions` in config file
#94
alexenge
closed
1 year ago
0
Add Python version to config
#93
alexenge
closed
1 year ago
0
Write package versions (pipeline, MNE, ...) to config file for future reference
#92
alexenge
closed
1 year ago
0
Write package versions to config
#91
alexenge
closed
1 year ago
0
Write `auto_missing_epochs` to config when magically detecting missing EEG trials via `triggers_column`
#90
alexenge
closed
1 year ago
0
Display warning (not error) when one of the `triggers` is not in the data
#89
alexenge
closed
1 year ago
0
Error when one of the `triggers` is not in the data
#88
alexenge
closed
1 year ago
0
Fix error when only a single bad channel is provided (instead of a list)
#87
alexenge
closed
1 year ago
0
Error when interpolating a single channel per subject in R
#86
alexenge
closed
1 year ago
0
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