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alexisvdb / singleCellHaystack

Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).
https://alexisvdb.github.io/singleCellHaystack/
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base of the logarithm #20

Closed fbnrst closed 2 years ago

fbnrst commented 2 years ago

show_result_haystack returns log.p.vals and log.p.adj. What is the base of the logarithm? Is this documented somewhere?

ddiez commented 2 years ago

It is log10, but I checked and it's not documented. We will add more information to the help page for show_result_haystack. Thanks!

fbnrst commented 2 years ago

Great, thanks!