alexkychen / assignPOP

Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446.
http://alexkychen.github.io/assignPOP/
GNU General Public License v3.0
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GenepopFormat #24

Open EmilioEgal opened 10 months ago

EmilioEgal commented 10 months ago

Hello, It's not an issue, but I have a comprehension problem. In a genepop file, -1 corresponds to 'Nocalling' ; 0 for AA ; 1 for AB ; 2 for BB And this, for each biallelic locus

But in your example, we have "Locus_1_01" and "Locus_1_02". For example, for one allele (1_01) at this locus -> 0 is 'Nocalling' ; 0.5 is major allele ; 1 is minor allele ?

I hope that I was clear. Thank you, Emilio Egal