algbio / ggcat

Compacted and colored de Bruijn graph construction and querying
MIT License
71 stars 11 forks source link

Plans to generate a GFA? #20

Open rlorigro opened 1 year ago

rlorigro commented 1 year ago

Hi,

Do you have any plans to produce a GFA output instead of a Fasta? it would be a natural way to represent the full graph with adjacency information betw unitigs

Thanks

elieling commented 4 months ago

Hi,

I would also be interested in getting GFA outputs.

Thank you