ali-ramadhan lagrangian-microbes issues

ali-ramadhan / lagrangian-microbes

🦐🐟🦈 A framework for simulating millions of interacting Lagrangian particles (or microbes!) in a turbulent ocean.

MIT License

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Rock-paper-scissors Slurm pipeline

#34 ali-ramadhan closed 5 years ago
0
Sandbox scripts

#33 ali-ramadhan closed 5 years ago
0
Fix joblib crash that always happens after ~8000 advection iterations

#32 ali-ramadhan closed 5 years ago
0
Analysis module with species count timeseries

#31 ali-ramadhan closed 5 years ago
0
Save OSCAR datasets to disk

#30 ali-ramadhan closed 5 years ago
0
Save OSCAR fields to disk (under tmp dir?)

#29 ali-ramadhan closed 5 years ago
0
Isotropic horizontal diffusion

#28 ali-ramadhan closed 5 years ago
2
Automatic movie generation with ffmpeg-python

#27 ali-ramadhan closed 5 years ago
0
Plotting from NetCDF and without background velocity field.

#26 ali-ramadhan closed 5 years ago
0
Zero velocity field option for debugging

#25 ali-ramadhan opened 5 years ago
0
NetCDF support

#24 ali-ramadhan closed 5 years ago
0
joblib does not like the microbe plotter

#23 ali-ramadhan closed 5 years ago
0
Ensemble runs

#22 ali-ramadhan closed 5 years ago
11
Add particle diffusivity.

#21 ali-ramadhan closed 5 years ago
0
Cannot simulate interactions by themselves :(

#20 ali-ramadhan closed 5 years ago
2
Interaction length scale should be defined in meters.

#19 ali-ramadhan opened 5 years ago
0
Distributed computing support (hundreds of processors)

#18 ali-ramadhan opened 5 years ago
1
Checkpointing

#17 ali-ramadhan opened 5 years ago
0
Plotting and movie making module.

#16 ali-ramadhan closed 5 years ago
1
Microbe interactions module

#15 ali-ramadhan closed 5 years ago
1
Particle advection module.

#14 ali-ramadhan closed 5 years ago
1
Put up some simulations on YouTube.

#13 ali-ramadhan opened 5 years ago
0
Documentation (can be a nice README for now)

#12 ali-ramadhan opened 5 years ago
0
Unit tests.

#11 ali-ramadhan opened 5 years ago
0
Examples

#10 ali-ramadhan closed 5 years ago
1
Analysis modules/functions.

#9 ali-ramadhan closed 5 years ago
0
Support for Lagrangian microbes with arbitrary properties.

#8 ali-ramadhan opened 5 years ago
0
Better way of writing output?

#7 ali-ramadhan closed 5 years ago
2
Turn lagrangian-microbes into a real Python package.

#6 ali-ramadhan opened 5 years ago
0
Ability to choose/define number of Lagrangian particles and their distribution.

#5 ali-ramadhan closed 5 years ago
1
Generically switch between different velocity fields.

#4 ali-ramadhan opened 5 years ago
0
Upgrade to using Parcels 2.0

#3 ali-ramadhan closed 5 years ago
1
Logging

#2 ali-ramadhan closed 5 years ago
0
Create LICENSE

#1 ali-ramadhan closed 5 years ago
0