Closed faroit closed 2 years ago
as we used a lot of packages that has version clashes with each other... for now, can only be put into wish list.
as we used a lot of packages that has version clashes with each other... for now, can only be put into wish list.
in that case i would suggest to add a conda environment file and a docker installation method
I do not use docker, but can provide conda environment file: https://github.com/alicia-ziying-yang/conTEXT-explorer/blob/main/ce-env.yml
I do not use docker, but can provide conda environment file: https://github.com/alicia-ziying-yang/conTEXT-explorer/blob/main/ce-env.yml
just tried this, please also add pip
to the conda dependencies
Warning: you have pip-installed dependencies in your environment file, but you do not list pip itself as one of your conda dependencies. Conda may not use the correct pip to install your packages, and they may end up in the wrong place. Please add an explicit pip dependency. I'm adding one for you, but still nagging you.
Ah, yes, fixed that by moving the pip to the front!
@alicia-ziying-yang i can confirm that the environment works fine
even though the installation issue is fixed in #15 I would suggest not tp freeze python to
python_requires='==3.7.5',
but instead find out the supported range of python versions to identify the problematic dependencies (and in turns fix the code support newer dependencies later)https://github.com/openjournals/joss-reviews/issues/3347