all-of-us / workbench-snippets

Code snippets for use in All of Us Workbench notebooks.
BSD 3-Clause "New" or "Revised" License
14 stars 6 forks source link

Unable to access cromshell_config.json if cromwell_server is set to empty string #82

Closed NehaBroad closed 1 year ago

NehaBroad commented 1 year ago

If Cromwell is not running in the workbench, executing the Cromwell snippet will result in the value of 'cromwell_server' in 'cromshell_config.json' being set to an empty string.

This empty value will cause the snippet to fail when attempting to run commands such as 'cromshell-alpha version' or 'cromshell-beta version' in subsequent runs.

Workbench PR: https://github.com/all-of-us/workbench/pull/7596 Unfortunately we don't have automated testing configured for the code in this repository yet so we set up this checklist as an automatic reminder:

Questions? See CONTRIBUTING.md or file an issue so that we can get it documented!