I just looked at this, and I'm happy to merge it with the Aspire repo! Thanks for the work! A few clarifications and requests before I merge:
As I understand, this is augmenting the sentence representations with additional entity representations as additional "sentences". Is this correct?
Do you mind supplying abstracts-csfcube-preds-ner-probs-labels.jsonl as well? The NER labels aren't part of CSFCube?
I see the NER/README references a PURE entity model. Can you link this if it is another repo or paper?
Could you make an addition to the main Aspire repo readme describing in a sentence or two what this project is? I can merge that as well. Perhaps do this under the repo contents section.
Code for the work if adding named entities extracted from the sentences to the the ASPIRE model. See README for details on files.