RUN ERROR：One or more of the specified paths to the sc data does not exist

almaan / stereoscope

Spatial mapping of cell types by integration of transcriptomics data

MIT License

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RUN ERROR：One or more of the specified paths to the sc data does not exist #35

Open yunbokai opened 1 year ago

yunbokai commented 1 year ago

Hi there, When I run the code stereoscope run --sc_cnt ../data/curated/*cnt*.tsv --sc_labels ../data/curated/*mta*.tsv -sce 75000 -o hippo_1 -n 5000 --st_cnt ../data/curated/st-hippo*tsv -ste 75000 --gpu -stb 100 -scb 100 I got the Error One or more of the specified paths to the sc data does not exist. However, I already processed the test data.

Thanks for your attention!