issues
search
almeidasilvaf
/
syntenet
An R package to infer and analyze synteny networks from protein sequences
https://almeidasilvaf.github.io/syntenet/
21
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Meaning of different node size in the network plot?
#23
YingChen94
closed
2 weeks ago
2
[BUG] Possible bug with find_GS_clusters
#22
dmacguigan
closed
6 months ago
2
Error in check_ngenes(seq, annotation)
#21
sujee119
closed
7 months ago
2
Syntenet error in infer_syntenet() Error in blast_list[[1]] : subscript out of bounds
#20
sujee119
closed
8 months ago
4
check_input issue with number of genes
#19
aurelim
closed
10 months ago
3
Add last sequence search
#18
kullrich
closed
1 year ago
1
.collinearity files with 0 collinear genes
#17
dmacguigan
closed
1 year ago
17
Parallelization of infer_syntenet
#16
dmacguigan
closed
1 year ago
2
unique species id in `process_input()`
#15
iaindhay
closed
1 year ago
1
Cant seem to pass check_input
#14
iaindhay
closed
1 year ago
2
[BUG] check_input does not work as intended
#13
dmacguigan
closed
1 year ago
15
check_input error
#12
jhcuarta
closed
1 year ago
3
Importing blast database
#11
PeterMulhair
closed
1 year ago
2
Error in profiles$profile_matrix : $ operator is invalid for atomic vectors
#10
alexvasilikop
closed
1 year ago
4
Error in plot_profiles 'cluster_species' must match column names of profile matrix.
#9
alexvasilikop
closed
1 year ago
5
Import data
#8
alexvasilikop
closed
2 years ago
7
Warning in cluster_network()
#7
xiaoyezao
closed
2 years ago
7
fix for cpp warnings
#6
kullrich
closed
2 years ago
1
# removed unnecessary comments
#5
kullrich
closed
2 years ago
0
C++ unit-testing
#4
kullrich
closed
2 years ago
0
verbose param
#3
kullrich
closed
2 years ago
1
# restructer cpp code to fix memory alloc bug
#2
kullrich
closed
2 years ago
0
#added mcscanxr.h, mcscanxr.cpp
#1
kullrich
closed
2 years ago
0