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althonos / pyhmmer

Cython bindings and Python interface to HMMER3.
https://pyhmmer.readthedocs.io
MIT License
128 stars 12 forks source link

PyHmmer installation error #44

Closed RSweeney25 closed 1 year ago

RSweeney25 commented 1 year ago

C:\Users\Irish\AppData\Local\Programs\Python\Python311\Lib\site-packages>pip install pyhmmer Collecting pyhmmer Downloading pyhmmer-0.8.2.tar.gz (11.0 MB) ---------------------------------------- 11.0/11.0 MB 9.5 MB/s eta 0:00:00 Installing build dependencies ... done Getting requirements to build wheel ... done Installing backend dependencies ... done Preparing metadata (pyproject.toml) ... done Requirement already satisfied: psutil~=5.8 in c:\users\irish\appdata\local\programs\python\python311\lib\site-packages (from pyhmmer) (5.9.5) Building wheels for collected packages: pyhmmer Building wheel for pyhmmer (pyproject.toml) ... error error: subprocess-exited-with-error

× Building wheel for pyhmmer (pyproject.toml) did not run successfully. │ exit code: 1

Is this a me issue or a PyHMMER issue? It seems to be downloading fine until the pyroject.toml file cant build the wheels properly. What is the best way to handle this issue?

althonos commented 1 year ago

Hi @RSweeney25, it looks like you're trying to install PyHMMER on Windows. HMMER (and consequently PyHMMER) is not supported on Windows because of how the code is written. You may be able to install PyHMMER by using the Windows Subsystem for Linux and using a Linux install of Python and PyHMMER there.