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althonos / pyrodigal

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
https://pyrodigal.readthedocs.org
GNU General Public License v3.0
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CLI option to write amino acids without stop codon #50

Closed zclaas closed 8 months ago

zclaas commented 8 months ago

Hi, Thank you for this program and the effort you put into it. Since the CLI already has a few additional parameters that deviate from the original prodigal, would you consider adding an option that would write the amino acid sequences without a stop codon?

althonos commented 8 months ago

Yes I don't see any problem to that :smile: Thanks for the PR, I'll include it in the upcoming patch!