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alvinxhan / Phydelity

Inference of putative transmission phylogenetic clusters
GNU Lesser General Public License v3.0
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Replace Gorubi with something fully open source? #3

Open tseemann opened 4 years ago

tseemann commented 4 years ago

The Gorubi licence is troublesome for HPC clusters. Can you replace your solver module with something unencumbered?

eg. https://pypi.org/project/glpk/

alvinxhan commented 4 years ago

Hi tseemann,

Apologies for the late reply. Yes, an open-source solver will be included in the next update (hopefully in a couple of weeks time?).

Cheers, Alvin

tseemann commented 4 years ago

Thanks @alvinxhan . I won't hold you to "a couple of weeks time" don't worry :)