search

alyssafrazee / polyester

Bioconductor package "polyester", devel version. RNA-seq read simulator.
http://biorxiv.org/content/early/2014/12/12/006015
90 stars 51 forks source link

Typo in the documentation re fold_changes in simulate_experiment #72

Open ning-y opened 4 years ago

ning-y commented 4 years ago

https://github.com/alyssafrazee/polyester/blob/29263d1a15ee7e33adef5d2d6aeeb93a6cb73d92/R/simulate_experiment.R#L135-L149

A fold change of X in matrix entry i,j means that for replicate j, the baseline mean number of reads (reads_per_transcript[i]) will be multiplied by X.

should probably be

A fold change of X in matrix entry i,j means that for group j, the baseline mean number of reads (reads_per_transcript[i]) will be multiplied by X.