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ambj / MuPeXI

MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
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Replace call to pandas's deprecated method #1

Closed koalive closed 7 years ago

koalive commented 7 years ago

The method pandas.DataFrame.sort_values replaced pandas.DataFrame.sort from pandas's version 0.17.0, and the call to the deprecated method was causing a bug preventing the writing of MuPeXI output files in environment with up-to-date versions of pandas (bug observed with pandas 0.20.1 but not with pandas 0.18.1).