ambj / MuPeXI

MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
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Unable to access the file http://www.cbs.dtu.dk/services/MuPeXI/SupplTable1.csv described at "MuPeXI: prediction of neo-epitopes from tumor sequencing data​" #42

Open zhaoxiaofei opened 1 year ago

zhaoxiaofei commented 1 year ago

Dear MuPeXI developers,

I read your paper entitled "​​MuPeXI: prediction of neo-epitopes from tumor sequencing data​" at https://doi.org/10.1007/s00262-017-2001-3. In Tables S1, it says that "The full table can be found at URL: http://www.cbs.dtu.dk/services/MuPeXI/SupplTable1.csv". Unfortunately, the URL does not work anymore. Do you know if there is any way to gain access to the full tables? More specifically, I would like to find the raw peptide-MHC pairs that were subject to the multimer-staining and/or T-cell reactivity assays.

Kind regards, Xiaofei

Please note that this is an issue related to the data availability of the manuscript (so this is not an issue related to the code).

zhaoxiaofei commented 1 year ago

It seems that the supplementary tables are in the "Abstract" tab of the web-paget at https://services.healthtech.dtu.dk/services/MuPeXI-1.1/