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amc-heme / scExploreR

Shiny app for single cell omics data visualization
https://amc-heme.github.io/scExploreR/
MIT License
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Document or improve interface for filtering DGE table results #273

Open wish1832 opened 1 month ago

wish1832 commented 1 month ago

The "..." syntax in the DGE tab is confusing to users, and the guidance for use is currently buried in the user vignettes. Since this interface is a built-in interface from the DT package, it may be better to design our own filtering interface (#168). Alternately, help icons could be added near the table with pop-up information describing how to use the "..." syntax.

jairav commented 1 month ago

For release, the alternate solution is the same as #12 which is being worked on.

jairav commented 1 month ago

Encountering an issue implementing tooltips (bslib) likely due to different versions of Bootstrap used by shiny related packages currently in use. Tooltips do not render in scExploreR. For now I have replaced the "..." icon with file-import for clarity. Done in 4ad7a6d as part of #12 . This issue can be closed.

wish1832 commented 1 month ago

Hey Jai, by the "..." syntax, I didn't mean the "..." button in the top right corner. I was referring to the syntax in the DGE tab to filter for ranges of values in the table. In the example below, I use the "..." syntax to filter for log-2 fold change values between 2 and 4.

This is a stock feature with DT data tables in Shiny, but it's not very intuitive. I think we could one-up this considerably if we invested time into it.

https://github.com/amc-heme/scExploreR/assets/45372167/cb8a5d1c-0c70-42bb-bc01-38bec9dccc2a