Closed BenoitMorel closed 1 year ago
Hi Alexey,
I am running the following command:
raxml-ng --threads 1 --tree trees.newick --consense STRICT
and I get the following error:
raxml-ng: /data/morelbt/github/pargenes/raxml-ng/src/bootstrap/ConsensusTree.cpp:78: virtual bool ConsensusTree::compute_support(): Assertion `node->data' failed. Aborted
Any idea of what could have gone wrong?
The file trees.newick contains 3 trees:
(((ENSPPAP00000014420:0.100000,ENSNLEP00000045783:0.100000):0.100000,ENSPANP00000046451:0.100000):0.100000,((ENSGGOP00000003262:0.100000,ENSP00000372160:0.100000):0.100000,ENSPTRP00000081358:0.100000):0.100000,((((((ENSMMUP00000024023:0.100000,ENSCSAP00000014233:0.100000):0.100000,ENSMICP00000043595:0.100000):0.100000,ENSMFAP00000031134:0.100000):0.100000,ENSTGEP00000006314:0.100000):0.100000,ENSCJAP00000005527:0.100000):0.100000,ENSPPYP00000010359:0.100000):0.100000); ((((((ENSNLEP00000045783:0.100000,ENSCSAP00000014233:0.100000):0.100000,ENSPPAP00000014420:0.100000):0.100000,ENSPANP00000046451:0.100000):0.100000,(ENSPPYP00000010359:0.100000,(((ENSMICP00000043595:0.100000,ENSMMUP00000024023:0.100000):0.100000,(ENSMFAP00000031134:0.100000,ENSTGEP00000006314:0.100000):0.100000):0.100000,ENSCJAP00000005527:0.100000):0.100000):0.100000):0.100000,ENSP00000372160:0.100000):0.100000,ENSGGOP00000003262:0.100000,ENSPTRP00000081358:0.100000); (ENSPANP00000046451:0.100000,((((ENSPPYP00000010359:0.100000,((((ENSPPAP00000014420:0.100000,ENSNLEP00000045783:0.100000):0.100000,ENSPTRP00000081358:0.100000):0.100000,ENSP00000372160:0.100000):0.100000,ENSGGOP00000003262:0.100000):0.100000):0.100000,ENSCJAP00000005527:0.100000):0.100000,((ENSMICP00000043595:0.100000,ENSMMUP00000024023:0.100000):0.100000,ENSCSAP00000014233:0.100000):0.100000):0.100000,ENSMFAP00000031134:0.100000):0.100000,ENSTGEP00000006314:0.100000);
Thanks! Benoit
fixed in master
Hi Alexey,
I am running the following command:
and I get the following error:
Any idea of what could have gone wrong?
The file trees.newick contains 3 trees:
Thanks! Benoit