unrecognized option '--search1'

amkozlov / raxml-ng

RAxML Next Generation: faster, easier-to-use and more flexible

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unrecognized option '--search1' #55

Closed lsuhpchelp closed 5 years ago

lsuhpchelp commented 5 years ago

v0.7.0 beta [cbro117@mike019 ng-tutorial]$ raxml-ng-mpi --search1 --msa prim.phy --model GTR+G --prefix T5 --threads 2 --seed 2 raxml-ng-mpi: unrecognized option '--search1' Other tests work so far. The installation seems ok, except "Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY)". Not sure if this is related to the "unrecognized option '--search1'"

amkozlov commented 5 years ago

Sorry for confusion, for the tutorial you need the latest RAxML-NG version from the dev branch. v0.7.0 does not have the --search1 command (in fact, --search in v0.7.0 corresponds to --search1 in v0.7.0dev, since I changed the default number of starting trees). I added corresponding warning to the tutorial.

Could NOT find GTest error has nothing to do with --search1, and as long as you don't need to run unit test, you can safely ignore it.

lsuhpchelp commented 5 years ago

Got it, many thanks!

amkozlov commented 5 years ago

you're welcome :)