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amkozlov / raxml-ng

RAxML Next Generation: faster, easier-to-use and more flexible
GNU Affero General Public License v3.0
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Error in raxml #75

Closed khuch123 closed 4 years ago

khuch123 commented 4 years ago

On running the following command in R, alignment.rax.gtr <- raxml(alignment, m="GTRGAMMAIX", # model f="a", # best tree and bootstrap p=1234, # random number seed x=5678, # random seed for rapid bootstrapping N=100, # number of bootstrap replicates file="alignment", # name of output files exec="raxmlHPC-PTHREADS-SSE3", # name of executable threads=20 ) The error is the following: Error in raxml(alignment, m = "GTRGAMMAIX", f = "a", p = 1234, x = 5678, : argument 4 matches multiple formal arguments

amkozlov commented 4 years ago

Sorry but I can't help here, since this error is coming from your R wrapper and not from RAxML.

Furthermore, please use google group to ask questions about RAxML: https://groups.google.com/forum/#!forum/raxml