amkrajewski / MPDD-X

[playing around for now] One stop solution for getting material properties with ML models while contributing to a community database.
MIT License
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[IN] #39

Open lukeamyers opened 3 months ago

lukeamyers commented 3 months ago

You do not need to put in anything here :)

Just open the issue by clicing the green "Submit new issue" and within 10-15s a message instructing you do upload your files should appear!

github-actions[bot] commented 3 months ago

Hello @lukeamyers! Please comment below on this issue while attaching a ZIP file with atomic structures (POSCAR/CIFs) to get started! You can put keywords describing it in the body of the comment.

As soon as you do it, your atomic structures will be processed through several tools, described below, and return a neat Markdown report.

lukeamyers commented 3 months ago

ybco6.zip

YBCO6

github-actions[bot] commented 3 months ago

👍 [1/3] I found the ZIP file linked in your comment. I will now attempt to download it and validate contents!

github-actions[bot] commented 3 months ago

😢 The files supplied in ZIP do not have one of the required extensions: CIF or POSCAR (or VASP). If you need another format to work, let us know!

lukeamyers commented 3 months ago

ybco6.zip

YBCO6

github-actions[bot] commented 3 months ago

👍 [1/3] I found the ZIP file linked in your comment. I will now attempt to download it and validate contents!

github-actions[bot] commented 3 months ago

👍 [2/3] I received your files and extracted them! Now, I will set up the calculation environment and run: pySIPFENN, CHGNet, and ALIGNN. You can now have A coffee and wait for results. Obtaining results should take at least a couple of minutes.

lukeamyers commented 3 months ago

ybco6_vol_10.zip

github-actions[bot] commented 3 months ago

👍 [1/3] I found the ZIP file linked in your comment. I will now attempt to download it and validate contents!

github-actions[bot] commented 3 months ago

👍 [2/3] I received your files and extracted them! Now, I will set up the calculation environment and run: pySIPFENN, CHGNet, and ALIGNN. You can now have A coffee and wait for results. Obtaining results should take at least a couple of minutes.

github-actions[bot] commented 3 months ago

🚀 [3/3] All Done! Your submission and all results been persisted under contrib.mpdd.org/c2412071. For results, please see the table below:

pySIPFENN: name SIPFENN_NN30-OQMD [eV/atom]
ybco6_vol_0.POSCAR -2.1219
ybco6_vol_1.POSCAR -2.1284
ybco6_vol_2.POSCAR -2.1344
ybco6_vol_3.POSCAR -2.14
ybco6_vol_4.POSCAR -2.1523
ybco6_vol_5.POSCAR -2.1489
ybco6_vol_6.POSCAR -2.1573
ybco6_vol_7.POSCAR -2.1597
ybco6_vol_8.POSCAR -2.1613
ybco6_vol_9.POSCAR -2.1614
ybco6_vol_10.POSCAR -2.1607
ALIGNN: name ALIGNN-JARVIS Formation Energy [eV/atom] ALIGNN-JARVIS MBJ Bandgap [eV] ALIGNN-JARVIS Shear Modulus [GPa] ALIGNN-JARVIS Bulk Modulus [GPa] ALIGNN-JARVIS Exfoliation Energy [meV/atom] ALIGNN-MP Formation Energy [eV/atom] ALIGNN-MP PBE Bandgap [eV]
ybco6_vol_0.POSCAR -2.1051 0.1154 46.3395 102.5103 133.131 -2.234 0.0059
ybco6_vol_1.POSCAR -2.1074 0.1167 44.9711 101.6913 135.7478 -2.2391 0.0206
ybco6_vol_2.POSCAR -2.1116 0.1705 43.5024 99.1959 136.1978 -2.2448 0.0014
ybco6_vol_3.POSCAR -2.1134 0.1703 42.9828 97.3296 135.7299 -2.2458 0.0147
ybco6_vol_4.POSCAR -2.1183 0.1666 38.1682 94.7947 127.1666 -2.2417 0.0142
ybco6_vol_5.POSCAR -2.114 0.1577 39.2721 95.7604 131.9534 -2.2446 0.0274
ybco6_vol_6.POSCAR -2.1196 0.1355 37.6345 94.3189 126.4777 -2.2419 -0.0006
ybco6_vol_7.POSCAR -2.1217 0.1029 36.9457 93.4488 124.8498 -2.2417 0.0115
ybco6_vol_8.POSCAR -2.1292 0.1289 36.6836 92.5109 122.0164 -2.2381 0.0171
ybco6_vol_9.POSCAR -2.1309 0.148 36.456 92.2103 119.1404 -2.2374 0.0811
ybco6_vol_10.POSCAR -2.1132 0.1311 33.8084 91.3065 120.1416 -2.2155 0.0692

CHGNet:

Please note that these are energies, not formation energies. Name CHGNet_0.3.0-MP Energy [eV/atom] CHGNet_0.3.0-MP Relaxed Energy [eV/atom]
ybco6_vol_0.POSCAR -6.5286 -6.5713
ybco6_vol_1.POSCAR -6.5422 -6.5717
ybco6_vol_2.POSCAR -6.5527 -6.5726
ybco6_vol_3.POSCAR -6.561 -6.5725
ybco6_vol_4.POSCAR -6.5722 -6.5729
ybco6_vol_5.POSCAR -6.5709 -6.5719
ybco6_vol_6.POSCAR -6.5738 -6.5738
ybco6_vol_7.POSCAR -6.5751 -6.5751
ybco6_vol_8.POSCAR -6.5748 -6.5748
ybco6_vol_9.POSCAR -6.5729 -6.5729
ybco6_vol_10.POSCAR -6.5698 -6.5737

For the next 30 days, you can also download other results like pySIPFENN's raw descriptor data Numpy array and CHGNet-relaxed structure files under Artifact tab here Enjoy!