Add graph component refinement algorithms

amnh / PCG

𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search

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Add graph component refinement algorithms #65

Open recursion-ninja opened 6 years ago

recursion-ninja commented 6 years ago

Add tree & network versions of TBR, SPR, NNI. Be sure to correct handle forest of components and multi-rooted DAGs. This should be done after the efficient graph editing has been abstracted in #13.