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amnh / PCG

𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search
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Remove gaps from unaligned, dynamic character inputs #69

Closed recursion-ninja closed 6 years ago

recursion-ninja commented 6 years ago

If a dynamic character is read in and has '-' as one or more dynamic character elements, it can break some string alignment invariants. We should remove gaps from the input sequences and emit a warning.

recursion-ninja commented 6 years ago

We now drop '-' dynamic character elements from inputs.