ADAM example: Cannot load Parquet without Hadoop on classpath

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ADAM example: Cannot load Parquet without Hadoop on classpath #172

Open kimballa opened 9 years ago

kimballa commented 9 years ago

Users may need to add HADOOP_HOME components to their classpath to leverage parquet. The compute-adam-classpath.sh script does not add any hadoop-common/hadoop-core/hadoop-client/etc jars to the classpath.

The java parquet.hadoop.PrintFooter adam/NA12878.adam command fails to execute for this reason.