Differences to the R version

[f6v]

Thanks for sharing the package! I wanted to clarify two questions:

• Matlab version of scAI doesn't have a function to select k, does it?
• The Matlab version actually uses chromVAR, unlike the R package?

[f6v]

Just noticed https://github.com/amsszlh/scAI/blob/master/identify_consensus_cluster.m I guess I could determine the cophenetic score with this function? @amsszlh

[amsszlh]

Yes, K is selected base on the cophenetic score. The chromVAR is used in Matlab version for downstream motif analysis.

[f6v]

Thanks!