Open robelgeda opened 3 years ago
I found an error while running AMI notebooks:
FIRSTFEW 5 OVERSAMPLE 7 Analyzing 0 jw01093001001_01101_00005_nis_calints F480M ABDOR ABDOR 5 InstrumentData.NIRISS: use bad pixel DQ extension data False InstrumentData.NIRISS: analysing firstfew=5 slices InstrumentData.NIRISS: *** WARNING *** InstrumentData: Top Hat filter being used --------------------------------------------------------------------------- TypeError Traceback (most recent call last) /var/folders/b7/t7k94wx54xb6pckfcg1jxv5r0001_3/T/ipykernel_45583/3320212334.py in <module> 24 usebp=False 25 ---> 26 main(fitsimdir=datasuperdir, 27 ifn=fnmir, 28 oversample=OVERSAMPLE, /var/folders/b7/t7k94wx54xb6pckfcg1jxv5r0001_3/T/ipykernel_45583/2231761077.py in main(fitsimdir, ifn, oversample, mnem, firstfew, verbose, usebp) 92 print("main: fitsimdir", fitsimdir) 93 ---> 94 aff, psf_offset_r, psf_offset_ff, fringepistons = raw_observables(ifn, fitsimdir, 95 oversample=oversample, 96 mnem=mnem, /var/folders/b7/t7k94wx54xb6pckfcg1jxv5r0001_3/T/ipykernel_45583/2231761077.py in raw_observables(fitsfn, fitsimdir, affine2d, psf_offset_find_rotation, psf_offset_ff, rotsearch_d, set_pistons, oversample, mnem, firstfew, usebp, verbose) 54 55 print(firstfew) ---> 56 niriss = InstrumentData.NIRISS(fobj[0].header['FILTER'], 57 usebp=usebp, 58 #bpexist=False, ~/miniconda3/envs/niriss_ami/lib/python3.8/site-packages/nrm_analysis/InstrumentData.py in __init__(self, filt, objname, src, out_dir, chooseholes, affine2d, bandpass, nbadpix, usebp, firstfew, **kwargs) 438 # Weighted mean wavelength in meters, etc, etc "central wavelength" for the filter: 439 from scipy.integrate import simps --> 440 self.lam_c[self.filt] = (self.throughput[:,1] * self.throughput[:,0]).sum() / self.throughput[:,0].sum() 441 area = simps(self.throughput[:,0], self.throughput[:,1]) 442 ew = area / self.throughput[:,0].max() # equivalent width TypeError: list indices must be integers or slices, not tuple
Hello, I also had this error, but only when WEBBPSF_PATH is not set. Setting WEBBPSF_PATH works fine, but this PR fixes the error for cases where WEBBPSF_PATH is not set. Thank you :) !
WEBBPSF_PATH
I found an error while running AMI notebooks: