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Freyja
Depth-weighted De-Mixing
BSD 2-Clause "Simplified" License
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Adaptive regularization method
#192
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joshuailevy
closed
7 months ago
joshuailevy
commented
7 months ago
adds in regularization, enabling robustness to higher error rate sequencing
decreases false positives, and associated estimated prevalence (especially with error prone seq)
also adds checks in prepLineageDict to ensure samples names are unique