Open abegehr opened 4 years ago
"As of conda 4.7, the free channel was removed from conda’s default channels." https://docs.anaconda.com/anaconda/user-guide/tasks/using-repositories/#free-channel
If you're using conda >=4.7, you need to add the free channel to /env.yml for creating the BICE conda environment: conda env create -f env.yml.
free
conda env create -f env.yml
Otherwise, you will get the following error log and BICE env will not have been created:
$ conda env create -f env.yml Collecting package metadata (repodata.json): done Solving environment: failed ResolvePackageNotFound: - setuptools==27.2.0=py36_0 - icu==54.1=0 - pip==9.0.1=py36_1 - pygpu==0.6.4=py36_0 - pyqt==5.6.0=py36_2 - pyparsing==2.1.4=py36_0 - libffi==3.2.1=1 - pytz==2017.2=py36_0 - gettext==0.19.8=1 - pyyaml==3.12=py36_0 - h5py==2.7.0=np112py36_0 - zlib==1.2.8=3 - markupsafe==0.23=py36_2 - werkzeug==0.12.2=py36_0 - six==1.10.0=py36_0 - glib==2.50.2=1 - mako==1.0.6=py36_0 - freetype==2.5.5=2 - cycler==0.10.0=py36_0 - libxml2==2.9.4=0 - wheel==0.29.0=py36_0 - networkx==1.11=py36_0 - fontconfig==2.12.1=3 - libgpuarray==0.6.4=0 - scikit-learn==0.18.1=np112py36_1 - libprotobuf==3.2.0=0 - readline==6.2=2 - sqlite==3.13.0=0 - expat==2.1.0=0 - mongo-driver==0.7.1=0 - cython==0.26=py36_0 - libpng==1.6.27=0 - nose==1.3.7=py36_1 - pandas==0.20.2=np112py36_0 - tk==8.5.18=0 - xz==5.2.2=1 - qt==5.6.2=2 - openssl==1.0.2l=0 - pcre==8.39=1 - numpy==1.12.1=py36_0 - scipy==0.19.1=np112py36_0 - decorator==4.1.2=py36_0 - matplotlib==2.0.2=np112py36_0 - psutil==5.2.2=py36_0 - boost==1.61.0=py36_0 - libiconv==1.14=0 - yaml==0.1.6=0 - mkl-service==1.1.2=py36_3 - hdf5==1.8.17=1 - libgcc==4.8.5=1 - jpeg==9b=0 - python==3.6.1=2 - python-dateutil==2.6.0=py36_0 - sip==4.18=py36_0 - libpq==9.5.4=0 - unixodbc==2.3.4=0 - mkl==2017.0.1=0 - libgfortran==3.0.0=1
To solve this for conda >=4.7, simply add - free to the channels section of /env.yml:
- free
channels: - defaults - free
Then create the conda environment by running conda env create -f env.yml.
I'm working on a fork of ComE using BGMM and made this change to my /env.yml here: https://github.com/abegehr/ComE/blob/master/env.yml#L4
"As of conda 4.7, the free channel was removed from conda’s default channels." https://docs.anaconda.com/anaconda/user-guide/tasks/using-repositories/#free-channel
If you're using conda >=4.7, you need to add the
freechannel to /env.yml for creating the BICE conda environment:conda env create -f env.yml.Otherwise, you will get the following error log and BICE env will not have been created:
To solve this for conda >=4.7, simply add
- freeto the channels section of /env.yml:Then create the conda environment by running
conda env create -f env.yml.I'm working on a fork of ComE using BGMM and made this change to my /env.yml here: https://github.com/abegehr/ComE/blob/master/env.yml#L4