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andreamrau / coseq

Co-Expression Analysis of Sequencing Data
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coseq main function error #5

Closed na396 closed 1 year ago

na396 commented 2 years ago

Greeting, I have the following error on coseq function. unable to find an inherited method for function ‘coseq’ for signature ‘"missing"’

the main call is coseq(counts = exp, K = 2:40, model = "kmeans", transformation = "logclr", seed = 123) where counts is an expression matrix, row: genes, columns: samples.

Thank you in advance

andreamrau commented 2 years ago

Hi, thanks for your question. What is class(exp), the class of your expression count data? Could you send a reproducible example and information about your R/coseq versions?