I pre-processed anndata objects as the existing documentation suggested, but then found the script errored when trying to access UMAP embeddings that didn't exist yet. It would be great to add a note about running UMAP on the anndata object first to the docs. Thanks!
I pre-processed anndata objects as the existing documentation suggested, but then found the script errored when trying to access UMAP embeddings that didn't exist yet. It would be great to add a note about running UMAP on the anndata object first to the docs. Thanks!