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andreas-wilm / lofreq3

LoFreq Version 3
MIT License
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Ignore non ACGT positions in reference #18

Closed andreas-wilm closed 3 years ago

andreas-wilm commented 3 years ago

See bug reported by Kostiantyn Dreval and Ryan Morin in LoFreq 2 somatic

https://github.com/CSB5/lofreq/issues/106

andreas-wilm commented 3 years ago

See https://github.com/CSB5/lofreq/pull/109

andreas-wilm commented 3 years ago

Options: Convert non-ACTGN to N in PositionData or ignore any non-ACTGN later. Chose to ignore before calling