When trying to compile my project I get the following error:
Latexmk: This is Latexmk, John Collins, 22 April 2016, version: 4.45.
Latexmk: Changing directory to '/Users/tobias/Dropbox/Seminararbeit/'
Rule 'biber .latex/main': File changes, etc:
Changed files, or newly in use since previous run(s):
'library.bib'
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Run number 1 of rule 'biber .latex/main'
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Running 'biber ".latex/main"'
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Latexmk: Found biber source file(s) [.latex/main.bcf library.bib]
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'.latex/main.bbl'
'main.tex'
------------
Run number 1 of rule 'pdflatex'
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Running 'pdflatex -interaction=nonstopmode -file-line-error -synctex=1 -shell-escape -recorder -output-directory="/Users/tobias/Dropbox/Seminararbeit/.latex" "main.tex"'
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SyncTeX: Can't rename /Users/tobias/Dropbox/Seminararbeit/.latex/main.synctex.gz(busy) to /Users/tobias/Dropbox/Seminararbeit/.latex/main.synctex.gz
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf'
======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf'
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'/Users/tobias/Dropbox/Seminararbeit/.latex/main.aux'
------------
Run number 2 of rule 'pdflatex'
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Running 'pdflatex -interaction=nonstopmode -file-line-error -synctex=1 -shell-escape -recorder -output-directory="/Users/tobias/Dropbox/Seminararbeit/.latex" "main.tex"'
------------
Latexmk: Found input bbl file '.latex/main.bbl'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: List of undefined refs and citations:
Reference `fig:grammar' on page 12 undefined on input line 105
Reference `fig:lexical' on page 11 undefined on input line 44
Reference `fig:nonterminal' on page 12 undefined on input line 81
Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf'
======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf'
Latexmk: Found biber source file(s) [.latex/main.bcf library.bib]
Latexmk: Summary of warnings:
Latex failed to resolve 3 reference(s)
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'.latex/main.aux'
'.latex/main.run.xml'
'/Users/tobias/Dropbox/Seminararbeit/.latex/main.aux'
------------
Run number 3 of rule 'pdflatex'
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------------
Running 'pdflatex -interaction=nonstopmode -file-line-error -synctex=1 -shell-escape -recorder -output-directory="/Users/tobias/Dropbox/Seminararbeit/.latex" "main.tex"'
------------
Latexmk: Found input bbl file '.latex/main.bbl'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf'
======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf'
Latexmk: Found biber source file(s) [.latex/main.bcf library.bib]
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'.latex/clarification.aux'
'.latex/main.aux'
'.latex/main.run.xml'
'/Users/tobias/Dropbox/Seminararbeit/.latex/main.aux'
------------
Run number 4 of rule 'pdflatex'
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Running 'pdflatex -interaction=nonstopmode -file-line-error -synctex=1 -shell-escape -recorder -output-directory="/Users/tobias/Dropbox/Seminararbeit/.latex" "main.tex"'
------------
Latexmk: Found input bbl file '.latex/main.bbl'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: List of undefined refs and citations:
Reference `fig:grammar' on page 12 undefined on input line 105
Reference `fig:lexical' on page 11 undefined on input line 44
Reference `fig:nonterminal' on page 12 undefined on input line 81
Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf'
======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf'
Latexmk: Found biber source file(s) [.latex/main.bcf library.bib]
Latexmk: Summary of warnings:
Latex failed to resolve 3 reference(s)
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'.latex/main.aux'
'.latex/main.run.xml'
'/Users/tobias/Dropbox/Seminararbeit/.latex/main.aux'
------------
Run number 5 of rule 'pdflatex'
------------
------------
Running 'pdflatex -interaction=nonstopmode -file-line-error -synctex=1 -shell-escape -recorder -output-directory="/Users/tobias/Dropbox/Seminararbeit/.latex" "main.tex"'
------------
SyncTeX: Can't rename /Users/tobias/Dropbox/Seminararbeit/.latex/main.synctex.gz(busy) to /Users/tobias/Dropbox/Seminararbeit/.latex/main.synctex.gz
Latexmk: Found input bbl file '.latex/main.bbl'
Latexmk: References changed.
Latexmk: References changed.
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: Log file says output to '.latex/main.pdf'
Latexmk: List of undefined refs and citations:
Reference `fig:grammar' on page 12 undefined on input line 105
Reference `fig:lexical' on page 11 undefined on input line 44
Reference `fig:nonterminal' on page 12 undefined on input line 81
Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf'
======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf'
Latexmk: Found biber source file(s) [.latex/main.bcf library.bib]
Latexmk: Summary of warnings:
Latex failed to resolve 3 reference(s)
Rule 'pdflatex': File changes, etc:
Changed files, or newly in use since previous run(s):
'.latex/main.aux'
'/Users/tobias/Dropbox/Seminararbeit/.latex/main.aux'
Latexmk: Maximum runs of pdflatex reached without getting stable files
Latexmk: Did not finish processing file 'main.tex':
'pdflatex' needed too many passes
Latexmk: Undoing directory change
Running latexmk -outdir=.latex -pdf main.tex -f -silent finishes after 4 runs.
After running the above command, the compilation runs fine in Atom for the first time. Afterwards I get Latexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf' ======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf' Latexmk: Found biber source file(s) [.latex/main.bcf library.bib] Latexmk: Summary of warnings: Latex failed to resolve 3 reference(s) Latexmk: Undoing directory change
When trying to compile my project I get the following error:
Running
latexmk -outdir=.latex -pdf main.tex -f -silent
finishes after 4 runs. After running the above command, the compilation runs fine in Atom for the first time. Afterwards I getLatexmk: ===For rule 'pdflatex', actual output '.latex/main.pdf' ======appears not to match expected output '/Users/tobias/Dropbox/Seminararbeit/.latex/main.pdf' Latexmk: Found biber source file(s) [.latex/main.bcf library.bib] Latexmk: Summary of warnings: Latex failed to resolve 3 reference(s) Latexmk: Undoing directory change
This is pretty annoying.