andyrimmer / Platypus

Platypus Variant Caller
GNU General Public License v3.0
105 stars 38 forks source link

BED end position should not be included #66

Open tdelhomme opened 7 years ago

tdelhomme commented 7 years ago

Hi Andy,

Running Platypus on a bed file would eventually give me variants at end positions of my bed. Following these rules the end position should be excluded from the analyses. If I am correct, this only needs to change this line in the code by adding -1.

BTW very good tool! Running time is very impressive.. :+1: