angelolab / ark-analysis

Integrated pipeline for multiplexed image analysis
https://ark-analysis.readthedocs.io/en/latest/
MIT License
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Ubuntu Linux GHA Runner caps the provided Storage #1024

Closed srivarra closed 1 year ago

srivarra commented 1 year ago

Please refer to our FAQ and look at our known issues before opening a bug report.

Describe the bug

As seen here: https://github.com/angelolab/ark-analysis/actions/runs/5578492698?pr=1023

The Ubuntu Runner uses all of it's provided storage space.

Expected behavior

The tests should run to completion, it looks like there is something going on regarding the example dataset.

To Reproduce

Make a PR and watch it run out of space on Ubuntu with Python 3.9, 3.10 and 3.11.