angelolab / ark-analysis

Integrated pipeline for multiplexed image analysis
https://ark-analysis.readthedocs.io/en/latest/
MIT License
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Filter FOVs in `calc_distance_matrix` #1056

Open srivarra opened 11 months ago

srivarra commented 11 months ago

Is your feature request related to a problem? Please describe.

The option to filter FOVs would be a nice addition for the neighborhood analysis workflow, as some FOVs may not be of interest such as controls.

Describe the solution you'd like

Include a FOVs parameter for calc_distance_matrix which will only load the FOVs supplied.

Describe alternatives you've considered

Another other option would be a regex pattern.

Additional context

N/A