Is your feature request related to a problem? Please describe.
In Pixie notebooks 2 and 3, the output of plot_pixel_cell_cluster is too large. It is annoying to manually shrink them, especially when looking at many FOVs. See screenshots for size.
Erosion should also be set to False for the pixel clustering notebook. It looks weird to have the edges eroded in the pixel cluster overlays. Erosion looks fine for the cell clustering notebook.
Describe the solution you'd like
Smaller cluster overlays for both pixel and cell clustering. No erosion for pixel cluster overlays.
Is your feature request related to a problem? Please describe. In Pixie notebooks 2 and 3, the output of
plot_pixel_cell_clusteris too large. It is annoying to manually shrink them, especially when looking at many FOVs. See screenshots for size.Erosion should also be set to False for the pixel clustering notebook. It looks weird to have the edges eroded in the pixel cluster overlays. Erosion looks fine for the cell clustering notebook.
Describe the solution you'd like Smaller cluster overlays for both pixel and cell clustering. No erosion for pixel cluster overlays.
Describe alternatives you've considered NA
Additional context
