Add multiple clustering resolution functionality

angelolab / ark-analysis

Integrated pipeline for multiplexed image analysis

https://ark-analysis.readthedocs.io/en/latest/

MIT License

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Closed camisowers closed 6 months ago

camisowers commented 8 months ago

If you haven't already, please read through our contributing guidelines before opening your PR

What is the purpose of this PR?

Closes #1070.

How did you implement your changes

Add helper function to create a new clustering column in the cell table. Include in notebook 4 with a description of the necessary inputs.

Remaining issues

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camisowers commented 7 months ago

The ark tests are still failing, but can you just review the newest changes so it's ready to go once we get that fixed? @alex-l-kong @srivarra