Pupillometry - Githubissues

anne-urai / human_ibl_snapshots

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Pupillometry #15

Open anne-urai opened 5 months ago

anne-urai commented 5 months ago

setup triggers in such a way that we can easily sync with EEG later https://www.eyetracking-eeg.org/
aim for bulls-eye to avoid recalibration after breaks

anne-urai commented 5 months ago

We should also talk with Chris and Evania from the COPAN lab about collecting facial video data together with eyetracking: #32

anne-urai commented 1 month ago

[ ] send triggers for fix and feedback
[ ] email SR about quitting safely + file transfer
[ ] plot pupil over session + locked to stim onset
[ ] add to experiment checklist: run edf2asc before transfer to J-Drive https://www.sr-research.com/support/thread-7674.html

anne-urai commented 3 weeks ago

first, use edf2asc tool

import mne

# load pupil data:
raw_et = mne.io.read_raw_eyelink(filename)
raw_et_df = raw_et.to_data_frame()
events = raw_et.annotations.to_data_frame()
events['onset'] = raw_et.annotations.onset

# interpolate blinks:
mne.preprocessing.eyetracking.interpolate_blinks(raw_et, buffer=(0.05, 0.1), interpolate_gaze=True)

anne-urai commented 1 week ago

Things to fix before pupil experiment works

[ ] instructions to fixate during the experiment?
[ ] no glasses, no eye make up (buy wipes)
[x] send triggers for fixation cross and feedback (ideally with information about stimulus contrast and feedback error/correct)
[ ] get sound to work properly